Genome-wide identification of the fibrillin gene family in chickpea (Cicer arietinum L.) and its response to drought stress

Int J Biol Macromol. 2023 Apr 15:234:123757. doi: 10.1016/j.ijbiomac.2023.123757. Epub 2023 Feb 18.

Abstract

Fibrillin family members play multiple roles in growth, development, and protection against abiotic stress. In this study, we identified 12 potential CaFBNs that are ranging from 25 kDa-42.92 kDa and are mostly basic. These proteins were hydrophilic in nature and generally resided in the chloroplast. The CaFBN genes were located on different chromosomes like 1, 4, 5, and 7. All FBNs shared conserved motifs and possessed a higher number of stress-responsive elements. For evolutionary analysis, a phylogenetic tree of CaFBNs with other plants' FBNs was constructed and clustered into 11 FBN subgroups. For expression analysis, 21 day old chickpea seedling was exposed to dehydration stress by withholding water. We also performed various physiological and biochemical analyses to check that plant changes at the physiological and cellular levels while undergoing stress conditions. The transcript expression of CaFBNs was higher in aerial parts, especially in stems and leaves. Dehydration-specific transcriptome and qPCR analysis showed that FBN-1, FBN-2, and FBN-6 were highly expressed. In addition, our study provides a comprehensive overview of the FBN protein family and their importance during the dehydration stress condition in Cicer arietinum.

Keywords: Dehydration stress; Fibrillin; Genome-wide identification; Phylogenetic analysis.

Publication types

  • Review

MeSH terms

  • Cicer* / genetics
  • Cicer* / metabolism
  • Dehydration / genetics
  • Droughts
  • Fibrillins / genetics
  • Fibrillins / metabolism
  • Gene Expression Regulation, Plant
  • Phylogeny
  • Plant Proteins / metabolism
  • Stress, Physiological / genetics

Substances

  • Fibrillins
  • Plant Proteins