Rhamnogalacturonan-I as a nematode chemoattractant from Lotus corniculatus L. super-growing root culture

Front Plant Sci. 2023 Jan 26:13:1008725. doi: 10.3389/fpls.2022.1008725. eCollection 2022.

Abstract

Introduction: The soil houses a tremendous amount of micro-organisms, many of which are plant parasites and pathogens by feeding off plant roots for sustenance. Such root pathogens and parasites often rely on plant-secreted signaling molecules in the rhizosphere as host guidance cues. Here we describe the isolation and characterization of a chemoattractant of plant-parasitic root-knot nematodes (Meloidogyne incognita, RKN).

Methods: The Super-growing Root (SR) culture, consisting of excised roots from the legume species Lotus corniculatus L., was found to strongly attract infective RKN juveniles and actively secrete chemoattractants into the liquid culture media. The chemo-attractant in the culture media supernatant was purified using hydrophobicity and anion exchange chromatography, and found to be enriched in carbohydrates.

Results: Monosaccharide analyses suggest the chemo-attractant contains a wide array of sugars, but is enriched in arabinose, galactose and galacturonic acid. This purified chemoattractant was shown to contain pectin, specifically anti-rhamnogalacturonan-I and anti-arabinogalactan protein epitopes but not anti-homogalacturonan epitopes. More importantly, the arabinose and galactose sidechain groups were found to be essential for RKN-attracting activities. This chemo-attractant appears to be specific to M. incognita, as it wasn't effective in attracting other Meloidogyne species nor Caenorhabditis elegans.

Discussion: This is the first report to identify the nematode attractant purified from root exudate of L corniculatus L. Our findings re-enforce pectic carbohydrates as important chemicals mediating micro-organism chemotaxis in the soil, and also highlight the unexpected utilities of the SR culture system in root pathogen research.

Keywords: Lotus corniculatus L.; chemotaxis; pectin; root-knot nematodes (Meloidogyne incognita); super roots.

Grants and funding

This work was supported by KAKENHI (21K19273, 20KK0135, 20H00422, 18H05487, and JPJSBP120223206) from the Japan Society for the Promotion of Science to SS, by the INRAE SPE department, by the French Government (National Research Agency, ANR) through the LabEx Signalife (#ANR-11-LABX-0028-01) and by the French-Japaneses bilateral collaboration programmes PHC SAKURA 2016 #35891VD and 2019 #43006VJ to BF.