The 1H, 15N and 13C resonance assignments of dengue virus capsid protein with the deletion of the intrinsically disordered N-terminal region

Biomol NMR Assign. 2023 Jun;17(1):23-26. doi: 10.1007/s12104-022-10115-1. Epub 2023 Feb 1.

Abstract

Dengue virus belongs to the Flaviviridae family, being responsible for an endemic arboviral disease in humans. It is an enveloped virus, whose genome is a positive-stranded RNA packaged by the capsid protein. Dengue virus capsid protein (DENVC) forms homodimers in solution organized in 4 α-helices and an intrinsically disordered N-terminal region. The N-terminal region is involved in the binding of membranous structures in host cells and in the recognition of nucleotides. Here we report the 1H, 15N and 13C resonance assignments of the DENVC with the deletion of the first 19 intrinsically disordered residues. The backbone chemical shift perturbations suggest changes in the α1 and α2 helices between full length and the truncated proteins.

Keywords: Capsid Protein; Capsid assembly; Dengue Virus; Intrinsically disordered region; NMR.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Capsid Proteins* / chemistry
  • Dengue Virus* / chemistry
  • Dengue Virus* / genetics
  • Dengue Virus* / metabolism
  • Humans
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Conformation, alpha-Helical
  • Protein Structure, Secondary

Substances

  • Capsid Proteins