Quantification of MicroRNAs or Viral RNAs with Microelectrode Sensors Enabled by Electrochemical Signal Amplification

Methods Mol Biol. 2023:2630:117-133. doi: 10.1007/978-1-0716-2982-6_9.

Abstract

Quantification of circulating microRNAs (miRNAs) or viral RNAs is of great significance because of their broad relevance to human health. Currently, quantitative reverse transcription polymerase chain reaction (qRT-PCR), as well as microarray and gene sequencing, are considered mainstream techniques for miRNA identification and quantitation and the gold standard for SARS-CoV2 detection in the COVID-19 pandemic. However, these laboratory techniques are challenged by the low levels and wide dynamic range (from aM to nM) of miRNAs in a physiological sample, as well as the difficulty in the implementation in point-of-care settings. Here, we describe a one-step label-free electrochemical sensing technique by assembling self-folded multi-stem DNA-redox probe structure on gold microelectrodes and introducing a reductant, tris(2-carboxyethyl) phosphine hydrochloride (TCEP), in the detection buffer solution to achieve ultrasensitive detection with a detection limit of 0.1 fM that can be further improved if needed.

Keywords: Electrochemical sensor; Folding-based sensor; Gold microelectrode; Label-free sensor; MiRNA detection; Non-enzymatic amplification; One-step detection.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Biosensing Techniques* / methods
  • COVID-19*
  • DNA Probes
  • Electrochemical Techniques / methods
  • Humans
  • Limit of Detection
  • Metal Nanoparticles* / chemistry
  • MicroRNAs* / analysis
  • Microelectrodes
  • Pandemics
  • RNA, Viral
  • SARS-CoV-2

Substances

  • MicroRNAs
  • RNA, Viral
  • DNA Probes