Cascade DNA Circuits Mediated CRISPR-Cas12a Fluorescent Aptasensor based on Multifunctional Fe3 O4 @hollow-TiO2 @MoS2 Nanochains for Tetracycline Determination

Small. 2023 Apr;19(16):e2206105. doi: 10.1002/smll.202206105. Epub 2023 Jan 22.

Abstract

Herein, for the first time, the CRISPR-Cas12a system is combined with aptamer, cascaded dynamic DNA network circuits, and Fe3 O4 @hollow-TiO2 @MoS2 nanochains (Fe3 O4 @h-TiO2 @MoS2 NCs) to construct an efficient sensing platform for tetracycline (TC) analysis. In this strategy, specific recognition of the target is transduced and amplified into H1-H2 duplexes containing the specific sequence of Cas12a-crRNA through an aptamer recognition module and the dual amplification dynamic DNA network. Subsequently, the obtained activated Cas12a protein non-specifically cleaves the adjacent reporter gene ssDNA-FAM to dissociate the FAM molecule from the quencher Fe3 O4 @h-TiO2 @MoS2 NCs, resulting in the recovery of the fluorescence signal and further signal amplification. Particularly, the synthesized multifunctional Fe3 O4 @h-TiO2 @MoS2 NCs composites also exhibit superb magnetic separability and photocatalytic degradation ability. Under optimal conditions, the aptasensor displays a distinct linear relationship with the logarithm of TC concentration, and the limit of detection is as low as 0.384 pg mL-1 . Furthermore, the results of spiked recovery confirm the viability of the proposed aptasensor for TC quantification in real samples. This study extends the application of the CRISPR-Cas12a system in the field of analytical sensing and contributes new insights into the exploration of reliable tools for monitoring and treating hazards in food and environment.

Keywords: CRISPR-Cas12a; cascaded dynamic DNA network circuits; fluorescence aptasensors; multifunctional Fe 3O 4@hollow-TiO 2@MoS 2 nanochains; photocatalytic degradation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents
  • Biosensing Techniques*
  • CRISPR-Cas Systems* / genetics
  • Coloring Agents
  • DNA
  • Fluorescent Dyes
  • Molybdenum
  • Oligonucleotides
  • Tetracycline

Substances

  • Anti-Bacterial Agents
  • Coloring Agents
  • DNA
  • Molybdenum
  • Oligonucleotides
  • Tetracycline
  • titanium dioxide
  • Fluorescent Dyes