DNAzyme-driven bipedal DNA walker for label-free and signal-on electrochemical detection of amyloid-β oligomer

Int J Biol Macromol. 2023 Feb 15:228:234-241. doi: 10.1016/j.ijbiomac.2022.12.216. Epub 2022 Dec 22.

Abstract

As a common technique for detecting AβO, the enzyme-linked immunosorbent assay (ELISA) method is time-consuming, high in cost, and poor in stability. Therefore, it is necessary to develop a highly sensitive, method-simple and low-cost method for the selective detection of AβO. Here, we created a novel signal-on and label-free electrochemical aptamer sensor for the detection of AβO based on a DNAzyme-driven DNA bipedal walking strategy. Compared with common DNA walkers, bipedal DNA walkers exhibit larger walking areas and faster walking kinetics, and provide higher amplification efficiency. The DNAwalker is powered by an Mg2+-dependent DNAzyme, and the binding-induced DNAwalker continuously clamps the MB, unlocking several active G-quadruplex-forming sequences. These G-quadruplexes can be further combined by hemin to generate a G-quadruplex/heme complex, resulting in an amperometric signal, resulting in a broad proportional band from 0.1 pM to 1 nM and an excellent detection range of 46 fM. A bipedal DNA walker aptamer sensor can detect human serum AβO with remarkable specificity, high reproducibility and practical application value.

Keywords: DNA walker; G-quadruplexs; Hemin.

MeSH terms

  • Amyloid beta-Peptides / genetics
  • Aptamers, Nucleotide*
  • Biosensing Techniques* / methods
  • DNA / genetics
  • DNA, Catalytic* / genetics
  • Electrochemical Techniques / methods
  • G-Quadruplexes*
  • Hemin
  • Humans
  • Limit of Detection
  • Reproducibility of Results

Substances

  • DNA, Catalytic
  • Amyloid beta-Peptides
  • DNA
  • Hemin
  • Aptamers, Nucleotide