pH-dependent kinetics of NO release from E. coli bd-I and bd-II oxidase reveals involvement of Asp/Glu58B

Biochim Biophys Acta Bioenerg. 2023 Apr 1;1864(2):148952. doi: 10.1016/j.bbabio.2022.148952. Epub 2022 Dec 16.

Abstract

Escherichia coli contains two cytochrome bd oxidases, bd-I and bd-II. The structure of both enzymes is highly similar, but they exhibit subtle differences such as the accessibility of the active site through a putative proton channel. Here, we demonstrate that the duroquinol:dioxygen oxidoreductase activity of bd-I increased with alkaline pH, whereas bd-II showed a broad activity maximum around pH 7. Likewise, the pH dependence of NO release from the reduced active site, an essential property of bd oxidases, differed between the two oxidases as detected by UV/vis spectroscopy. Both findings may be attributed to differences in the proton channel leading to the active site heme d. The channel comprises a titratable residue (Asp58B in bd-I and Glu58B in bd-II). Conservative mutations at this position drastically altered NO release demonstrating its contribution to the process.

Keywords: Bacterial adaptation; Cytochrome bd-I oxidase, cytochrome bd-II oxidase; E. coli; NO; Oxygen reduction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cytochrome b Group / genetics
  • Cytochromes / chemistry
  • Electron Transport Chain Complex Proteins / metabolism
  • Electron Transport Complex IV
  • Escherichia coli
  • Escherichia coli Proteins* / metabolism
  • Hydrogen-Ion Concentration
  • Oxidoreductases* / metabolism
  • Protons

Substances

  • Oxidoreductases
  • Cytochromes
  • Protons
  • Escherichia coli Proteins
  • Cytochrome b Group
  • Electron Transport Chain Complex Proteins
  • Electron Transport Complex IV