Simple N-Glycan Profile Analysis Using Lectin Staining, Mass Spectrometry, and GlycoMaple

Methods Mol Biol. 2023:2557:691-707. doi: 10.1007/978-1-0716-2639-9_41.

Abstract

The Golgi apparatus is one of the major sites of protein and lipid glycosylation and processing. Protein N-glycosylation plays critical roles in protein folding, transport, stability, and activity. Various glycosyltransferases and glycoside hydrolases are localized at each cisterna in the Golgi apparatus and synthesize a large variety of N-glycan structures. The biosynthetic pathways of N-glycans are complicated, which hiders the rational design of glycan metabolic pathways. In addition, the analysis of glycan structure requires specialized instruments for analyses such as mass spectrometry, high-performance liquid chromatography, and nuclear magnetic resonance spectroscopy, which are not familiar to all laboratories. Here, we introduce relatively simple methods for N-glycan analysis, including disruption of genes encoding glycosyltransferases or glycoside hydrolases, glycan structural analysis using lectins and mass spectrometry, and visualization of glycan metabolic pathways in silico.

Keywords: Gene disruption; Glycan metabolism; Glycoengineering; Mass spectrometry.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Glycoside Hydrolases / metabolism
  • Glycosyltransferases* / metabolism
  • Lectins*
  • Mass Spectrometry
  • Polysaccharides / chemistry
  • Staining and Labeling

Substances

  • Lectins
  • Glycosyltransferases
  • Polysaccharides
  • Glycoside Hydrolases