Peculiarities of Scattering of Ultrashort Laser Pulses on DNA and RNA Trinucleotides

Int J Mol Sci. 2022 Dec 6;23(23):15417. doi: 10.3390/ijms232315417.

Abstract

Currently, X-ray diffraction analysis (XRD) with high spatial and time resolution (TR-XRD) is based on the known theory of X-ray scattering, where the main parameter of USP-its duration-is not taken into account. In the present work, it is shown that, for scattering of attosecond USPs on DNA and RNA trinucleotides, the pulse length is the most important scattering parameter. The diffraction pattern changes considerably in comparison with the previously known scattering theory. The obtained results are extremely important in TR-XRD when using attosecond pulses to study trinucleotides of DNA and RNA, because with the previously known scattering theory, which does not take into account the duration of USP, one cannot correctly interpret, and therefore "decode", DNA and RNA structures.

Keywords: CAG; CCG; CGG; CUG; DNA; RNA; X-ray diffraction; X-ray scattering; trinucleotides; ultrashort pulse.

MeSH terms

  • Crystallography, X-Ray
  • DNA
  • Lasers*
  • RNA*
  • X-Rays

Substances

  • RNA
  • DNA