Surface electrostatics dictate RNA-binding protein CAPRIN1 condensate concentration and hydrodynamic properties

J Biol Chem. 2023 Jan;299(1):102776. doi: 10.1016/j.jbc.2022.102776. Epub 2022 Dec 7.

Abstract

Biomolecular condensates concentrate proteins, nucleic acids, and small molecules and play an essential role in many biological processes. Their formation is tuned by a balance between energetically favorable and unfavorable contacts, with charge-charge interactions playing a central role in some systems. The positively charged intrinsically disordered carboxy-terminal region of the RNA-binding protein CAPRIN1 is one such example, phase separating upon addition of negatively charged ATP or high concentrations of sodium chloride (NaCl). Using solution NMR spectroscopy, we measured residue-specific near-surface electrostatic potentials (ϕENS) of CAPRIN1 along its NaCl-induced phase separation trajectory to compare with those obtained using ATP. In both cases, electrostatic shielding decreases ϕENS values, yet surface potentials of CAPRIN1 in the two condensates can be different, depending on the amount of NaCl or ATP added. Our results establish that even small differences in ϕENS can significantly affect the level of protein enrichment and the mechanical properties of the condensed phase, leading, potentially, to the regulation of biological processes.

Keywords: NMR; biomolecular condensates; electrostatics; intrinsically disordered protein; phase separation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate
  • Hydrodynamics*
  • Intrinsically Disordered Proteins* / chemistry
  • RNA-Binding Proteins* / chemistry
  • Sodium Chloride / metabolism
  • Static Electricity

Substances

  • Adenosine Triphosphate
  • Intrinsically Disordered Proteins
  • RNA-Binding Proteins
  • Sodium Chloride