Alicyclobacillus mali FL18 as a Novel Source of Glycosyl Hydrolases: Characterization of a New Thermophilic β-Xylosidase Tolerant to Monosaccharides

Int J Mol Sci. 2022 Nov 18;23(22):14310. doi: 10.3390/ijms232214310.

Abstract

A thermo-acidophilic bacterium, Alicyclobacillus mali FL18, was isolated from a hot spring of Pisciarelli, near Naples, Italy; following genome analysis, a novel putative β-xylosidase, AmβXyl, belonging to the glycosyl hydrolase (GH) family 3 was identified. A synthetic gene was produced, cloned in pET-30a(+), and expressed in Escherichia coli BL21 (DE3) RIL. The purified recombinant protein, which showed a dimeric structure, had optimal catalytic activity at 80 °C and pH 5.6, exhibiting 60% of its activity after 2 h at 50 °C and displaying high stability (more than 80%) at pH 5.0-8.0 after 16 h. AmβXyl is mainly active on both para-nitrophenyl-β-D-xylopyranoside (KM 0.52 mM, kcat 1606 s-1, and kcat/KM 3088.46 mM-1·s-1) and para-nitrophenyl-α-L-arabinofuranoside (KM 10.56 mM, kcat 2395.8 s-1, and kcat/KM 226.87 mM-1·s-1). Thin-layer chromatography showed its ability to convert xylooligomers (xylobiose and xylotriose) into xylose, confirming that AmβXyl is a true β-xylosidase. Furthermore, no inhibitory effect on enzymatic activity by metal ions, detergents, or EDTA was observed except for 5 mM Cu2+. AmβXyl showed an excellent tolerance to organic solvents; in particular, the enzyme increased its activity at high concentrations (30%) of organic solvents such as ethanol, methanol, and DMSO. Lastly, the enzyme showed not only a good tolerance to inhibition by xylose, arabinose, and glucose, but was activated by 0.75 M xylose and up to 1.5 M by both arabinose and glucose. The high tolerance to organic solvents and monosaccharides together with other characteristics reported above suggests that AmβXyl may have several applications in many industrial fields.

Keywords: Alicyclobacillus mali; glycosyl hydrolases; thermophiles; β-xylosidase.

MeSH terms

  • Arabinose
  • Glucose
  • Hydrogen-Ion Concentration
  • Kinetics
  • Monosaccharides*
  • Solvents
  • Substrate Specificity
  • Xylose / metabolism
  • Xylosidases* / metabolism

Substances

  • exo-1,4-beta-D-xylosidase
  • 4-nitrophenyl
  • Monosaccharides
  • Xylose
  • Arabinose
  • Xylosidases
  • Glucose
  • Solvents

Supplementary concepts

  • Alicyclobacillus mali