Biomolecular Condensation of the Human Papillomavirus E2 Master Regulator with p53: Implications in Viral Replication

J Mol Biol. 2023 Aug 15;435(16):167889. doi: 10.1016/j.jmb.2022.167889. Epub 2022 Nov 17.

Abstract

p53 exerts its tumour suppressor activity by modulating hundreds of genes and it can also repress viral replication. Such is the case of human papillomavirus (HPV) through targeting the E2 master regulator, but the biochemical mechanism is not known. We show that the C-terminal DNA binding domain of HPV16 E2 protein (E2C) triggers heterotypic condensation with p53 at a precise 2/1 E2C/p53 stoichiometry at the onset for demixing, yielding large regular spherical droplets that increase in size with E2C concentration. Interestingly, transfection experiments show that E2 co-localizes with p53 in the nucleus with a grainy pattern, and recruits p53 to chromatin-associated foci, a function independent of the DNA binding capacity of p53 as judged by a DNA binding impaired mutant. Depending on the length, DNA can either completely dissolve or reshape heterotypic droplets into irregular condensates containing p53, E2C, and DNA, and reminiscent of that observed linked to chromatin. We propose that p53 is a scaffold for condensation in line with its structural and functional features, in particular as a promiscuous hub that binds multiple cellular proteins. E2 appears as both client and modulator, likely based on its homodimeric DNA binding nature. Our results, in line with the known role of condensation in eukaryotic gene enhancement and silencing, point at biomolecular condensation of E2 with p53 as a means to modulate HPV gene function, strictly dependent on host cell replication and transcription machinery.

Keywords: E2 DNA binding domain; Human papillomavirus; LLPS; Viral protein; p53.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomolecular Condensates* / metabolism
  • Biomolecular Condensates* / virology
  • Cell Line, Tumor
  • Chromatin / chemistry
  • Chromatin / metabolism
  • DNA / chemistry
  • DNA / metabolism
  • DNA Replication*
  • DNA-Binding Proteins* / chemistry
  • DNA-Binding Proteins* / metabolism
  • Human papillomavirus 16* / physiology
  • Humans
  • Oncogene Proteins, Viral* / chemistry
  • Oncogene Proteins, Viral* / metabolism
  • Papillomavirus Infections / virology
  • Protein Domains
  • Tumor Suppressor Protein p53* / genetics
  • Tumor Suppressor Protein p53* / metabolism
  • Virus Replication* / physiology

Substances

  • Chromatin
  • DNA
  • DNA-Binding Proteins
  • E2 protein, Human papillomavirus type 16
  • Oncogene Proteins, Viral
  • Tumor Suppressor Protein p53