Hydrogen bond networks of dimethylsulfoxide (DMSO) pentamer

J Mol Graph Model. 2023 Jan:118:108363. doi: 10.1016/j.jmgm.2022.108363. Epub 2022 Oct 17.

Abstract

Understanding of clusters of dimethylsulfoxide (DMSO) is important in several applications in Chemistry. Despite its importance, very few studies of DMSO clusters, (DMSO)n, have been reported in comparison to systems such as water clusters or methanol clusters. In order to provide further understanding of DMSO clusters, we investigated the structures and non-covalent interactions of the (DMSO)n, n=5. Therefore, the potential energy surface (PES) of the DMSO pentamer has been examined using classical molecular dynamics. The structures generated using classical molecular dynamics are further optimized at the PW6B95D3/aug-cc-pVDZ level of theory. To comprehend the non-covalent bondings in the DMSO pentamer, we carried out a quantum theory of atoms in molecule (QTAIM) analysis. In addition, the effects of temperature on the structural stability is investigated between 20 and 500K. It comes out that seven different kind of non-covalent bondings can be found in DMSO pentamers.

Keywords: DMSO pentamer; Non-covalent bondings; QTAIM analysis; Relative energies; Structures.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Dimethyl Sulfoxide* / chemistry
  • Hydrogen Bonding
  • Molecular Dynamics Simulation
  • Quantum Theory*
  • Water / chemistry

Substances

  • Dimethyl Sulfoxide
  • Water