Hydrogen-Bond Donors in Drug Design

J Med Chem. 2022 Nov 10;65(21):14261-14275. doi: 10.1021/acs.jmedchem.2c01147. Epub 2022 Oct 25.

Abstract

Hydrogen-bond donors are seen to cause more problems for drug designers than hydrogen-bond acceptors. Most of the polarity in drug-like compounds comes from hydrogen-bond acceptors since they typically exceed the hydrogen-bond donors in number and are more heavily solvated on an individual basis. The implications of this polarity imbalance for optimization of permeability and aqueous solubility are discussed. A factor that should be considered in optimization of ligand recognition by targets is that the presence of a hydrogen-bond donor generally implies that a hydrogen-bond acceptor is also present (but not vice versa). Frustrated solvation and secondary electrostatic interactions result from aligned hydrogen-bond donors and acceptors, and the design opportunities presented by these phenomena are discussed. Hydrogen-bond donors based on oxygen, nitrogen and carbon are compared as target recognition elements, and halogen- and chalcogen-bond donors are discussed as hydrogen-bond donor equivalents.

Publication types

  • Review

MeSH terms

  • Drug Design
  • Halogens* / chemistry
  • Hydrogen Bonding
  • Hydrogen*
  • Static Electricity

Substances

  • Halogens
  • Hydrogen