Structural biology of DOCK-family guanine nucleotide exchange factors

FEBS Lett. 2023 Mar;597(6):794-810. doi: 10.1002/1873-3468.14523. Epub 2022 Nov 4.

Abstract

DOCK proteins are a family of multi-domain guanine nucleotide exchange factors (GEFs) that activate the RHO GTPases CDC42 and RAC1, thereby regulating several RHO GTPase-dependent cellular processes. DOCK proteins are characterized by the catalytic DHR2 domain (DOCKDHR2 ), and a phosphatidylinositol(3,4,5)P3 -binding DHR1 domain (DOCKDHR1 ) that targets DOCK proteins to plasma membranes. DOCK-family GEFs are divided into four subfamilies (A to D) differing in their specificities for CDC42 and RAC1, and the composition of accessory signalling domains. Additionally, the DOCK-A and DOCK-B subfamilies are constitutively associated with ELMO proteins that auto-inhibit DOCK GEF activity. We review structural studies that have provided mechanistic insights into DOCK-protein functions. These studies revealed how a conserved nucleotide sensor in DOCKDHR2 catalyses nucleotide exchange, the basis for how different DOCK proteins activate specifically CDC42 and RAC1, and sometimes both, and how up-stream regulators relieve the ELMO-mediated auto-inhibition. We conclude by presenting a model for full-length DOCK9 of the DOCK-D subfamily. The involvement of DOCK GEFs in a range of diseases highlights the importance of gaining structural insights into these proteins to better understand and specifically target them.

Keywords: CDC42; DOCK proteins; RAC1; guanine nucleotide exchange factors.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biology
  • Guanine Nucleotide Exchange Factors* / metabolism
  • Nucleotides / metabolism
  • Signal Transduction
  • cdc42 GTP-Binding Protein* / metabolism
  • rac1 GTP-Binding Protein / metabolism
  • rho GTP-Binding Proteins / genetics

Substances

  • Guanine Nucleotide Exchange Factors
  • cdc42 GTP-Binding Protein
  • rho GTP-Binding Proteins
  • Nucleotides
  • rac1 GTP-Binding Protein