Spatial modeling reveals nuclear phosphorylation and subcellular shuttling of YAP upon drug-induced liver injury

Elife. 2022 Oct 18:11:e78540. doi: 10.7554/eLife.78540.

Abstract

The Hippo signaling pathway controls cell proliferation and tissue regeneration via its transcriptional effectors yes-associated protein (YAP) and transcriptional coactivator with PDZ-binding motif (TAZ). The canonical pathway topology is characterized by sequential phosphorylation of kinases in the cytoplasm that defines the subcellular localization of YAP and TAZ. However, the molecular mechanisms controlling the nuclear/cytoplasmic shuttling dynamics of both factors under physiological and tissue-damaging conditions are poorly understood. By implementing experimental in vitro data, partial differential equation modeling, as well as automated image analysis, we demonstrate that nuclear phosphorylation contributes to differences between YAP and TAZ localization in the nucleus and cytoplasm. Treatment of hepatocyte-derived cells with hepatotoxic acetaminophen (APAP) induces a biphasic protein phosphorylation eventually leading to nuclear protein enrichment of YAP but not TAZ. APAP-dependent regulation of nuclear/cytoplasmic YAP shuttling is not an unspecific cellular response but relies on the sequential induction of reactive oxygen species (ROS), RAC-alpha serine/threonine-protein kinase (AKT, synonym: protein kinase B), as well as elevated nuclear interaction between YAP and AKT. Mouse experiments confirm this sequence of events illustrated by the expression of ROS-, AKT-, and YAP-specific gene signatures upon APAP administration. In summary, our data illustrate the importance of nuclear processes in the regulation of Hippo pathway activity. YAP and TAZ exhibit different shuttling dynamics, which explains distinct cellular responses of both factors under physiological and tissue-damaging conditions.

Keywords: DILI; Hippo pathway; TAZ; acetaminophen; computational biology; human; medicine; mouse; partial differential equations; systems biology.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetaminophen / toxicity
  • Adaptor Proteins, Signal Transducing / metabolism
  • Animals
  • Chemical and Drug Induced Liver Injury*
  • Mice
  • Nuclear Proteins / metabolism
  • Phosphoproteins / metabolism
  • Phosphorylation
  • Protein Serine-Threonine Kinases
  • Proto-Oncogene Proteins c-akt* / metabolism
  • Reactive Oxygen Species / metabolism
  • Serine / metabolism
  • Threonine / metabolism
  • YAP-Signaling Proteins

Substances

  • Proto-Oncogene Proteins c-akt
  • Adaptor Proteins, Signal Transducing
  • Phosphoproteins
  • Acetaminophen
  • Reactive Oxygen Species
  • Protein Serine-Threonine Kinases
  • YAP-Signaling Proteins
  • Nuclear Proteins
  • Threonine
  • Serine

Associated data

  • GEO/GSE167032

Grants and funding

The funders had no role in study design, data collection, and interpretation, or the decision to submit the work for publication.