Genetic Variants of VDR and PGC-1α Are Not Associated with the Risk of Endometriosis in Indian Women

DNA Cell Biol. 2022 Nov;41(11):987-995. doi: 10.1089/dna.2022.0350. Epub 2022 Oct 14.

Abstract

An aberrant immunologic mechanism and mitochondrial biogenesis have been suggested to be involved in the pathogenesis of endometriosis. Genetic alterations in the vitamin D receptor (VDR) gene and peroxisome proliferator-activated receptor-gamma coactivator 1α (PGC-1α) may lead to important defects in gene activation, which principally affect immune function and normal mitochondrial function. Therefore, we hypothesized a possible role of VDR and PGC-1α genes in the pathogenesis of endometriosis and analyzed the association of genetic variants ApaI A/C (rs7975232) and TaqI T/C (rs731236) of VDR and rs8192678 (G/A), rs13131226 (T/C), and rs2970856 (T/C) of PGC-1α gene. This study included a total of 425 reproductive-age women (cases = 200 and controls = 225). Detection of VDR and PGC-1α gene polymorphism was performed using polymerase chain reaction-restriction fragment length polymorphism and sequencing analysis. The chi-square test was used to compare allele and genotype frequencies between groups, and a p-value of <0.05 was considered statistically significant. The genotype and allele distribution of both the gene polymorphisms did not show statistically significant association with endometriosis. Our result indicated ApaI A and TaqI T of VDR and GTT of PGC-1α gene as the most common haplotype in Indian women. The data suggest that VDR and PGC-1α gene polymorphisms did not play an important role in the pathogenesis of endometriosis in Indian women studied.

Keywords: Indian women; endometriosis; peroxisome proliferator-activated receptor-gamma coactivator 1α; vitamin D receptor gene.

MeSH terms

  • Asian People
  • Endometriosis* / genetics
  • Female
  • Genetic Predisposition to Disease / genetics
  • Genotype
  • Humans
  • Imidoesters
  • Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha* / genetics
  • Polymorphism, Genetic
  • Polymorphism, Single Nucleotide
  • Receptors, Calcitriol* / genetics

Substances

  • Imidoesters
  • methyl 4-azidophenylacetimidate
  • Receptors, Calcitriol
  • VDR protein, human
  • PPARGC1A protein, human
  • Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha