Comparative Proteomics of Potato Cultivars with a Variable Dormancy Period

Molecules. 2022 Oct 5;27(19):6621. doi: 10.3390/molecules27196621.

Abstract

The control of the duration of the dormancy phase is a significant challenge in the potato industry and for seed producers. However, the proteome landscape involved in the regulation of the length of the dormancy period over potato cultivars remains largely unexplored. In this study, we performed for the first time a comparative proteome profiling of potato cultivars with differential duration of tuber dormancy. More specifically, the proteome profiling of Agata, Kennebec and Agria commercial potato varieties with short, medium and medium-long dormancy, respectively, was assessed at the endodormancy stage using high-resolution two-dimensional electrophoresis (2-DE) coupled to reversed-phase liquid chromatography-tandem mass spectrometry (LC-TripleTOF MS/MS). A total of 11 proteins/isoforms with statistically significant differential abundance among cultivars were detected on 2-DE gels and confidently identified by LC-TripleTOF MS/MS. Identified proteins have known functions related to tuber development, sprouting and the oxylipins biosynthesis pathway. Fructokinase, a mitochondrial ADP/ATP carrier, catalase isozyme 2 and heat shock 70 kDa were the proteins with the strongest response to dormancy variations. To the best of our knowledge, this study reports the first candidate proteins underlying variable dormancy length in potato cultivars.

Keywords: Solanum tuberosum; catalase; dormancy; endodormancy; hydrogen peroxide; lipid mobilization; oxylipins; paradormancy; α-ketol.

MeSH terms

  • Adenosine Diphosphate / metabolism
  • Adenosine Triphosphate / metabolism
  • Catalase / metabolism
  • Fructokinases / analysis
  • Fructokinases / metabolism
  • Isoenzymes / metabolism
  • Oxylipins / metabolism
  • Plant Proteins / metabolism
  • Plant Tubers / chemistry
  • Proteome / metabolism
  • Proteomics / methods
  • Solanum tuberosum* / chemistry
  • Tandem Mass Spectrometry

Substances

  • Isoenzymes
  • Oxylipins
  • Plant Proteins
  • Proteome
  • Adenosine Diphosphate
  • Adenosine Triphosphate
  • Catalase
  • Fructokinases

Grants and funding

This research was supported by funds from the Consellería do Medio Rural (Xunta de Galicia, Spain).