Discovery and characterization of a novel cGAS covalent inhibitor for the treatment of inflammatory bowel disease

Acta Pharmacol Sin. 2023 Apr;44(4):791-800. doi: 10.1038/s41401-022-01002-5. Epub 2022 Oct 13.

Abstract

Cyclic GMP-AMP synthase (cGAS), a cytosolic DNA sensor, acts as a nucleotidyl transferase that catalyzes ATP and GTP to form cyclic GMP-AMP (cGAMP) and plays a critical role in innate immunity. Hyperactivation of cGAS-STING signaling contributes to hyperinflammatory responses. Therefore, cGAS is considered a promising target for the treatment of inflammatory diseases. Herein, we report the discovery and identification of several novel types of cGAS inhibitors by pyrophosphatase (PPiase)-coupled activity assays. Among these inhibitors, 1-(1-phenyl-3,4-dihydro-1H-pyrrolo[1,2-a]pyrazin-2-yl)prop-2-yn-1-one (compound 3) displayed the highest potency and selectivity at the cellular level. Compound 3 exhibited better inhibitory activity and pathway selectivity than RU.521, which is a selective cGAS inhibitor with anti-inflammatory effects in vitro and in vivo. Thermostability analysis, nuclear magnetic resonance and isothermal titration calorimetry assays confirmed that compound 3 directly binds to the cGAS protein. Mass spectrometry and mutation analysis revealed that compound 3 covalently binds to Cys419 of cGAS. Notably, compound 3 demonstrated promising therapeutic efficacy in a dextran sulfate sodium (DSS)-induced mouse colitis model. These results collectively suggest that compound 3 will be useful for understanding the biological function of cGAS and has the potential to be further developed for inflammatory disease therapies.

Keywords: covalent inhibitor; cyclic GMP-AMP synthase; high-throughput screening; inflammatory bowel disease.

MeSH terms

  • Animals
  • DNA / metabolism
  • Immunity, Innate*
  • Inflammatory Bowel Diseases* / drug therapy
  • Mice
  • Nucleotidyltransferases* / antagonists & inhibitors
  • Pyrazines / chemistry
  • Pyrazines / pharmacology
  • Pyrroles / chemistry
  • Pyrroles / pharmacology
  • Signal Transduction

Substances

  • DNA
  • Nucleotidyltransferases
  • Pyrroles
  • Pyrazines