Molecular characterization of a novel endornavirus isolated from Ophiostoma bicolor associated with bark beetles

Arch Virol. 2022 Dec;167(12):2839-2843. doi: 10.1007/s00705-022-05613-5. Epub 2022 Oct 13.

Abstract

Ophiostoma bicolor is a pathogenic fungus associated with bark beetles that can cause serious damage to host plants. In this study, a novel fungal virus, "Ophiostoma bicolor endornavirus 1" (ObEV1), was obtained from O. bicolor, and its complete genome sequence was determined. ObEV1 has a single-stranded positive-sense (+ ss) RNA genome of 10,119 nucleotides. Sequence annotation and comparison showed that the viral genome has a single large open reading frame (ORF) encoding a polyprotein of 362.48 kDa. The polyprotein contains seven conserved domains: RNA-dependent RNA polymerase (RdRp), viral RNA helicase 1 (VHel1), viral methyltransferase (VMet), DEAD-like helicase (DEXDc), gliding-GltJ (G1), large tegument protein UL36 (PHA), and YlqF-related-GTPase (Y). Sequence comparisons and phylogenetic analysis showed that ObEV1 is a novel mycovirus belonging to the genus Betaendornavirus of the family Endornaviridae. This is the first report of a mycovirus in the ophiostomatoid fungus O. bicolor.

MeSH terms

  • Fungal Viruses*
  • Genome, Viral
  • Open Reading Frames
  • Phylogeny
  • Polyproteins / genetics
  • RNA Viruses*
  • RNA, Viral / genetics
  • Viral Proteins / genetics

Substances

  • Viral Proteins
  • Polyproteins
  • RNA, Viral

Supplementary concepts

  • Ophiostoma bicolor