Rapid detection of hepatitis B virus DNA level based on interval-point data fusion of infrared spectra

J Biophotonics. 2023 Mar;16(3):e202200251. doi: 10.1002/jbio.202200251. Epub 2022 Oct 11.

Abstract

Hepatitis B is an infectious disease cause by the hepatitis B virus (HBV). In recent years, HBV-DNA level clinically gets more attention for its detailed information than other serological markers. Unfortunately, common clinical method for HBV-DNA level detection is limited for its hours consuming. This study combined infrared spectroscopy with machine learning to investigate the feasibility of near-infrared (NIR) and mid-infrared (MIR) spectra for rapid detection of HBV-DNA level. Based on partial least squares-discriminant analysis (PLS-DA) modeling method, the optimal NIR and MIR models and traditional data fusion models were constructed, respectively. Considering inequal weight between interval and point data in machine learning, interval-point data fusion method was used to compare with other traditional date fusion methods. The results of the study illustrate that interval-point data fusion of NIR and MIR spectra combined with PLS-DA modeling can provide a rapid method for HBV-DNA level detection.

Keywords: HBV-DNA level; infrared spectroscopy; interval-point data fusion; machine learning.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Viral
  • Discriminant Analysis
  • Hepatitis B virus*
  • Least-Squares Analysis
  • Spectrophotometry, Infrared
  • Spectroscopy, Near-Infrared* / methods

Substances

  • DNA, Viral