Synthesis and Study of Dibenzo[ b, f]oxepine Combined with Fluoroazobenzenes-New Photoswitches for Application in Biological Systems

Molecules. 2022 Sep 8;27(18):5836. doi: 10.3390/molecules27185836.

Abstract

Dibenzo[b, f]oxepine derivatives are an important scaffold in natural, medicinal chemistry, and these derivatives occur in several medicinally relevant plants. Two dibenzo[b, f]oxepines were selected and connected with appropriate fluorine azobenzenes. In the next step, the geometry of E/Z isomers was analyzed using density functional theory (DFT) calculations. Then the energies of the HOMO and LUMO orbitals were calculated for the E/Z isomers to determine the HOMO-LUMO gap. Next, modeling of the interaction between the obtained isomers of the compounds and the colchicine α and β-tubulin binding site was performed. The investigated isomers interact with the colchicine binding site in tubulin with a part of the dibenzo[b, f]oxepine or in a part of the azo switch, or both at the same time. Based on the UV-VIS spectra, it was found that in the case of compounds with an azo bond in the meta position, the absorption bands n→π* for both geometric isomers and their separation from π→π* are visible. These derivatives therefore have the potential to be used in photopharmacology.

Keywords: NMR and UV-VIS spectra; dibenzo[b, f]oxepine derivatives; photopharmacology.

MeSH terms

  • Binding Sites
  • Colchicine
  • Fluorine
  • Oxepins* / chemistry
  • Tubulin*

Substances

  • Oxepins
  • Tubulin
  • Fluorine
  • Colchicine

Grants and funding

The research was funded by the Warsaw University of Technology within the Excellence Initiative: Research University (IDUB) program (NChem3). This work was implemented as a part of Operational Project Knowledge Education Development 2014–2020 co-financed by the European Social Fund, Project No POWR.03.02.00-00-I007/16-00 (POWER 2014-2020) and by the Diamond Grant project (the scientific work financed from budget funds for science in the years 2019–2023).