The Identification of APOBEC3G as a Potential Prognostic Biomarker in Acute Myeloid Leukemia and a Possible Drug Target for Crotonoside

Molecules. 2022 Sep 7;27(18):5804. doi: 10.3390/molecules27185804.

Abstract

The apolipoprotein B mRNA editing enzyme catalytic subunit 3G (APOBEC3G) converts cytosine to uracil in DNA/RNA. Its role in resisting viral invasion has been well documented. However, its expression pattern and potential function in AML remain unclear. In this study, we carried out a bioinformatics analysis and revealed that the expression of APOBEC3G was significantly upregulated in AML, and high expression of APOBEC3G was significantly associated with short overall survival (OS). APOBEC3G expression was especially increased in non-M3AML, and correlated with the unfavorable cytogenetic risks. Additionally, Cox regression analyses indicated APOBEC3G is a hazard factor that cannot be ignored for OS of AML patients. In molecular docking simulations, the natural product crotonoside was found to interact well with APOBEC3G. The expression of APOBEC3G is the highest in KG-1 cells, and the treatment with crotonoside can reduce the expression of APOBEC3G. Crotonoside can inhibit the viability of different AML cells in vitro, arrest KG-1 and MV-4-11 cells in the S phase of the cell cycle and affect the expression of cycle-related proteins, and induce cell apoptosis. Therefore, APOBEC3G could be a potential drug target of crotonoside, and crotonoside can be considered as a lead compound for APOBEC3G inhibition in non-M3 AML.

Keywords: AML; anti-tumor activities; apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 3G (APOBEC3G) gene; bioinformatics analysis; crotonoside; prognosis.

MeSH terms

  • APOBEC-1 Deaminase
  • APOBEC-3G Deaminase / genetics
  • Adenosine
  • Biological Products*
  • Biomarkers
  • Cytidine Deaminase / genetics
  • Cytidine Deaminase / metabolism
  • Cytosine
  • Guanosine
  • HIV-1* / genetics
  • Humans
  • Leukemia, Myeloid, Acute* / drug therapy
  • Leukemia, Myeloid, Acute* / genetics
  • Molecular Docking Simulation
  • Prognosis
  • RNA
  • Uracil

Substances

  • Biological Products
  • Biomarkers
  • Guanosine
  • isoguanosine
  • Uracil
  • RNA
  • Cytosine
  • APOBEC-1 Deaminase
  • APOBEC-3G Deaminase
  • APOBEC3G protein, human
  • Cytidine Deaminase
  • Adenosine