Far-Field Electrostatic Signatures of Macromolecular 3D Conformation

Nano Lett. 2022 Oct 12;22(19):7834-7840. doi: 10.1021/acs.nanolett.2c02485. Epub 2022 Sep 20.

Abstract

In solution as in vacuum, the electrostatic field distribution in the vicinity of a charged object carries information on its three-dimensional geometry. We report on an experimental study exploring the effect of molecular shape on long-range electrostatic interactions in solution. Working with DNA nanostructures carrying approximately equal amounts of total charge but each in a different three-dimensional conformation, we demonstrate that the geometry of the distribution of charge in a molecule has substantial impact on its electrical interactions. For instance, a tetrahedral structure, which is the most compact distribution of charge we tested, can create a far-field effect that is effectively identical to that of a rod-shaped molecule carrying half the amount of total structural charge. Our experiments demonstrate that escape-time electrometry (ETe) furnishes a rapid and facile method to screen and identify 3D conformations of charged biomolecules or molecular complexes in solution.

Keywords: 3D conformation; DNA nanostructures; Electrostatics; electrometry; molecular interactions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA* / chemistry
  • Macromolecular Substances / chemistry
  • Molecular Conformation
  • Protein Conformation
  • Static Electricity

Substances

  • Macromolecular Substances
  • DNA