Self-assembly of a peptide sequence, EKKE, composed of exclusively charged amino acids: Role of charge in morphology and lead binding

J Pept Sci. 2023 Feb;29(2):e3451. doi: 10.1002/psc.3451. Epub 2022 Sep 22.

Abstract

The self-assembly of peptides is influenced by their amino acid sequence and other factors including pH, charge, temperature, and solvent. Herein, we explore whether a four-residue sequence, EKKE, consisting of exclusively charged amino acids shows the propensity to form self-assembled ordered nanostructures and whether the overall charge plays any role in morphological and functional properties. From a combination of experimental data provided by Thioflavin T fluorescence, Congo red absorbance, circular dichroism spectroscopy, dynamic light scattering, field emission-scanning electron microscopy, atomic force microscopy, and confocal microscopy, it is clear that the all-polar peptide and charged EKKE sequence shows a pH-dependent tendency to form amyloid-like structures, and the self-assembled entities under acidic, basic and neutral conditions exhibit morphological variation. Additionally, the ability of the self-assembled amyloid nanostructures to bind to the toxic metal, lead (Pb2+ ), was demonstrated from the analysis of the ultraviolet absorbance and X-ray photoelectron spectroscopy data. The modulation at the sequence level for the amyloid-forming EKKE scaffold can further extend its potential role not only in the remediation of other toxic metals but also towards biomedical applications.

Keywords: ThT fluorescence; X-ray photoelectron spectroscopy; amyloid; peptide; scanning electron microscopy; self-assembly.

MeSH terms

  • Amino Acid Sequence
  • Amino Acids*
  • Amyloid / chemistry
  • Circular Dichroism
  • Microscopy, Atomic Force
  • Microscopy, Electron, Scanning
  • Peptides* / chemistry

Substances

  • Amino Acids
  • Peptides
  • Amyloid