Advanced DNA Zipper Probes for Detecting Cell Membrane Lipid Domains

Nano Lett. 2022 Sep 28;22(18):7579-7587. doi: 10.1021/acs.nanolett.2c02605. Epub 2022 Sep 9.

Abstract

The cell membrane is a complex mixture of lipids, proteins, and other components. By forming dynamic lipid domains, different membrane molecules can selectively interact with each other to control cell signaling. Herein, we report several new types of lipid-DNA conjugates, termed as "DNA zippers", which can be used to measure cell membrane dynamic interactions and the formation of lipid domains. Dependent on the choice of lipid moieties, cholesterol- and sphingomyelin-conjugated DNA zippers specifically locate in and detect membrane lipid-ordered domains, while in contrast, a tocopherol-DNA zipper can be applied for the selective imaging of lipid-disordered phases. These versatile and programmable probes can be further engineered into membrane competition assays to simultaneously detect multiple types of membrane dynamic interactions. These DNA zipper probes can be broadly used to study the correlation between lipid domains and various cellular processes, such as the epithelial-mesenchymal transition.

Keywords: DNA probes; cell membrane analysis; fluorescence imaging; lipid domains; lipid−DNA conjugates; membrane order.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural

MeSH terms

  • Cell Membrane / metabolism
  • Cholesterol / metabolism
  • Complex Mixtures / metabolism
  • DNA / metabolism
  • Lipid Bilayers / metabolism
  • Membrane Lipids* / metabolism
  • Membrane Microdomains
  • Sphingomyelins*
  • Tocopherols / metabolism

Substances

  • Complex Mixtures
  • Lipid Bilayers
  • Membrane Lipids
  • Sphingomyelins
  • DNA
  • Cholesterol
  • Tocopherols