Molecular Mechanisms of Alu and LINE-1 Interspersed Repetitive Sequences Reveal Diseases of Visual System Dysfunction

Ocul Immunol Inflamm. 2023 Nov;31(9):1848-1858. doi: 10.1080/09273948.2022.2112238. Epub 2022 Aug 30.

Abstract

Background: Short interspersed nuclear elements (SINEs) and long interspersed nuclear elements (LINE-1s) are the abundant and well-characterized repetitive elements in the human genome.

Methods: For this review, all relevant original research studies were assessed by searching electronic databases, including PubMed, Google Scholar, and Web of Science, by using relevant keywords. Accumulating evidence indicates that the disorder of gene expression regulated by these repetitive sequences is one of the causes of the diseases of visual system dysfunction, including retinal degenerations, glaucoma, retinitis punctata albescens, retinitis pigmentosa, geographic atrophy, and age-related macular degeneration, suggesting that SINEs and LINE-1s may have great potential implications in ophthalmology.

Results: Alu elements belonging to the SINEs are present in more than one million copies, comprising 10% of the human genome.

Conclusion: This study offers recent advances in Alu and LINE-1 mechanisms in the development of eye diseases. The current study could advance our knowledge of the roles of SINEs and LINE-1s in the developing process of eye diseases, suggesting new diagnostic biomarkers, therapeutic strategies, and significant points for future studies.

Keywords: Age-related eye disease; LINE-1s; SINEs; interspersed repetitive sequences; retrotransposons; transposon.

Plain language summary

This study reveals the Alu and LINE-1 interspersed repetitive sequences involved in the diseases of visual system dysfunction.This study shows the disorder of gene expression regulated by SINEs and LINE-1s sequences is one of the causes of the diseases of visual system dysfunction.This study suggests recent advances in Alu and LINE-1 mechanisms are involved in eye diseases.

Publication types

  • Review

MeSH terms

  • Alu Elements* / genetics
  • Eye Diseases* / diagnosis
  • Eye Diseases* / genetics
  • Humans
  • Interspersed Repetitive Sequences
  • Long Interspersed Nucleotide Elements / genetics