Structural and Dynamic Effects of PTEN C-Terminal Tail Phosphorylation

J Chem Inf Model. 2022 Sep 12;62(17):4175-4190. doi: 10.1021/acs.jcim.2c00441. Epub 2022 Aug 24.

Abstract

The phosphatase and tensin homologue deleted on chromosome 10 (PTEN) tumor suppressor gene encodes a tightly regulated dual-specificity phosphatase that serves as the master regulator of PI3K/AKT/mTOR signaling. The carboxy-terminal tail (CTT) is key to regulation and harbors multiple phosphorylation sites (Ser/Thr residues 380-385). CTT phosphorylation suppresses the phosphatase activity by inducing a stable, closed conformation. However, little is known about the mechanisms of phosphorylation-induced CTT-deactivation dynamics. Using explicit solvent microsecond molecular dynamics simulations, we show that CTT phosphorylation leads to a partially collapsed conformation, which alters the secondary structure of PTEN and induces long-range conformational rearrangements that encompass the active site. The active site rearrangements prevent localization of PTEN to the membrane, precluding lipid phosphatase activity. Notably, we have identified phosphorylation-induced allosteric coupling between the interdomain region and a hydrophobic site neighboring the active site in the phosphatase domain. Collectively, the results provide a mechanistic understanding of CTT phosphorylation dynamics and reveal potential druggable allosteric sites in a previously believed clinically undruggable protein.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Molecular Dynamics Simulation
  • PTEN Phosphohydrolase* / chemistry
  • PTEN Phosphohydrolase* / metabolism
  • Phosphatidylinositol 3-Kinases* / metabolism
  • Phosphorylation
  • Protein Structure, Secondary
  • Signal Transduction

Substances

  • PTEN Phosphohydrolase