Classification of myocardial fibrosis in DE-MRI based on semi-supervised semantic segmentation and dual attention mechanism

Comput Methods Programs Biomed. 2022 Oct:225:107041. doi: 10.1016/j.cmpb.2022.107041. Epub 2022 Jul 26.

Abstract

Objective: It is essential to utilize cardiac delayed-enhanced magnetic resonance imaging (DE-MRI) to diagnose cardiovascular disease. By segmenting myocardium DE-MRI images, it provides critical information for the evaluation and treatment of myocardial infarction. As a consequence, it is vital to investigate the segmentation and classification technique of myocardial DE-MRI.

Methods: Firstly, an end-to-end minimally supervised and semi-supervised semantic DE-MRI myocardial fibrosis segmentation framework is proposed, which combines image classification and semantic segmentation branches based on the self-attention mechanism. Following that, a residual hole network fused with the dual attention mechanism was built, and a double attention metabolic pathway classification method for cardiac fibrosis in DE-MRI images was developed.

Results: By adding pixel-level labels to an extra 40 training images, the segmentation model may enhance semantic segmentation performance by 2.6 percent (from 61.2 percent to 63.8 percent). When the number of pixel-level labels is increased to 80, semi-supervised feature extraction increases by 4.7 percent when compared to weakly guided semantic segmentation. Adding an attention mechanism to the critical network DRN (Deep Residual Network) can increase the classifier's performance by a small amount. Experiments revealed that the models worked effectively.

Conclusion: This paper investigates the segmentation and classification of cardiac fibrosis in DE-MRI data using a semi-supervised semantic segmentation and dual attention mechanism, dealing with the issue that existing segmentation algorithms have difficulty segmenting myocardial fibrosis tissue. In the future, we can consider optimizing the design of the attention module to reduce the module computation.

Keywords: Cardiac Image Classification; DE-MRI; Dual Attention Mechanism; Myocardial Fibrosis; Semi-Supervised Semantic Segmentation.

MeSH terms

  • Algorithms
  • Fibrosis
  • Humans
  • Image Processing, Computer-Assisted* / methods
  • Magnetic Resonance Imaging / methods
  • Semantics*