High-resolution transcriptomics of bovine purified protein derivative-stimulated peripheral blood from cattle infected with Mycobacterium bovis across an experimental time course

Tuberculosis (Edinb). 2022 Sep:136:102235. doi: 10.1016/j.tube.2022.102235. Epub 2022 Jul 30.

Abstract

Objectives: Improved bovine tuberculosis (bTB) diagnostics with higher sensitivity and specificity are urgently required. A better understanding of the peripheral blood transcriptional response of Mycobacterium bovis-infected animals after bovine purified protein derivative (PPD-b) stimulation of whole blood-an important component of current bTB diagnostics-will provide new information for development of better diagnostics.

Methods: RNA sequencing (RNA-seq) was used to study the peripheral blood transcriptome after stimulation with PPD-b across four time points (-1 wk pre-infection, and +1 wk, +2 wk, and +10 wk post-infection) from a 14-week M. bovis infection time course experiment with ten age-matched Holstein-Friesian cattle.

Results: In vitro PPD-b stimulation of peripheral blood from M. bovis-infected and non-infected cattle elicited a strong transcriptional response. Comparison of PPD-b stimulated, and unstimulated samples revealed higher expression of genes encoding cytokine receptors, transcription factors, and interferon-inducible proteins. Lower expression was seen for genes encoding proteins involved in antimicrobial activity, C-type lectin receptors, inhibition of signal transduction, and genes encoding metal ion transporters.

Conclusions: A transcriptional signature associated with the peripheral blood response to PPD-b stimulation consisting of 170 genes was identified exclusively in the post-infection time points. Therefore, this represents a panel of potential biomarkers of M. bovis infection.

Keywords: Biomarker; Blood; Bovine tuberculosis; Diagnostics; Mycobacterium bovis; Transcriptomics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Anti-Infective Agents*
  • Antigens, Bacterial
  • Biomarkers
  • Cattle
  • Interferons
  • Lectins, C-Type
  • Mycobacterium bovis*
  • Mycobacterium tuberculosis*
  • Receptors, Cytokine
  • Transcription Factors
  • Transcriptome
  • Tuberculin
  • Tuberculosis, Bovine* / diagnosis
  • Tuberculosis, Bovine* / genetics

Substances

  • Anti-Infective Agents
  • Antigens, Bacterial
  • Biomarkers
  • Lectins, C-Type
  • Receptors, Cytokine
  • Transcription Factors
  • Tuberculin
  • Interferons