Virus Elimination from Naturally Infected Field Cultivars of Potato (Solanum tuberosum) by Transgenic RNA Interference

Int J Mol Sci. 2022 Jul 20;23(14):8020. doi: 10.3390/ijms23148020.

Abstract

Tissue culture methods enable virus elimination from vegetatively propagated crop plants but cannot prevent new infections. Here we used a tissue culture transgenic approach for curing field cultivars of Solanum tuberosum through the stimulation of RNA interference (RNAi)-based antiviral defenses. Expression cassettes carrying inverted repeats of potato virus S (PVS, genus Carlavirus) movement or coat protein sequences were used for the transformation of potato cultivars naturally infected with PVS and/or a related carlavirus potato virus M (PVM), without or with potato virus Y (PVY, genus Potyvirus). A high proportion of transformants PCR-positive for transgenes were cured from both carlaviruses and PVY. After 3-year field trials, 22 transgenic lines representing seven cultivars remained free of any virus or became infected only with PVY. Vegetative progenies of the transgenic lines of cultivar Zeren (initially coinfected with PVS, PVM, and PVY), sampled after in vitro propagation or field trials, and other field cultivars accumulated transgene-derived 21, 22, and 24 nt small interfering (si)RNAs almost exclusively from the PVS inverted repeats. Additionally, some field progenies accumulated 21-22 nt siRNAs from the entire PVY genome, confirming PVY infection. Taken together, transgenic RNAi is effective for virus elimination from naturally infected potato cultivars and their sequence-specific immunization against new infections.

Keywords: RNA interference; Solanum tuberosum; carlavirus; field trials; potato virus M; potato virus S; siRNAs; transgenic plants; virus elimination; virus resistance.

MeSH terms

  • Carlavirus
  • Plant Diseases / genetics
  • Plant Diseases / prevention & control
  • Potyvirus* / physiology
  • RNA Interference
  • RNA, Small Interfering / genetics
  • RNA, Small Interfering / metabolism
  • Solanum tuberosum*

Substances

  • RNA, Small Interfering

Supplementary concepts

  • Potato virus M

Grants and funding

This research was funded by Ministry of Education and Science of the Republic of Kazakhstan, program number OR11465447; and by INRAE (Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement) department SPE, project ViroMix.