Isolation and Genome Sequencing of Hepatitis E Virus Genotype 1 Imported from India to Japan

Jpn J Infect Dis. 2022 Nov 22;75(6):604-607. doi: 10.7883/yoken.JJID.2022.127. Epub 2022 Jun 30.

Abstract

Hepatitis E virus (HEV) is the causative agent of viral hepatitis E. In Japan, HEV genotype 3 (G3) and G4 are predominantly detected, while G1, mainly imported from countries in continental Asia, is rare. In the present study, we detected a G1 HEV strain in a patient who visited Japan from India. When PLC/PRF/5 cells (subclone 4-21) were inoculated with a stool suspension from this patient, accumulation of HEV RNA was observed in the spent culture medium, indicating that HEV had been successfully isolated from this specimen. A nearly complete HEV genome was obtained by RT-PCR amplification. Phylogenetic analyses revealed that the newly isolated HEV strain, designated 9HE36c, belongs to subtype 1g of HEV G1.

Keywords: PLC/PRF/5; genotype 1; hepatitis E virus; subtype 1g.

MeSH terms

  • Genotype
  • Hepatitis E virus* / genetics
  • Hepatitis E*
  • Humans
  • Japan
  • Phylogeny
  • RNA, Viral / analysis
  • RNA, Viral / genetics

Substances

  • RNA, Viral