miRNAs Copy Number Variations Repertoire as Hallmark Indicator of Cancer Species Predisposition

Genes (Basel). 2022 Jun 10;13(6):1046. doi: 10.3390/genes13061046.

Abstract

Aging is one of the hallmarks of multiple human diseases, including cancer. We hypothesized that variations in the number of copies (CNVs) of specific genes may protect some long-living organisms theoretically more susceptible to tumorigenesis from the onset of cancer. Based on the statistical comparison of gene copy numbers within the genomes of both cancer-prone and -resistant species, we identified novel gene targets linked to tumor predisposition, such as CD52, SAT1 and SUMO. Moreover, considering their genome-wide copy number landscape, we discovered that microRNAs (miRNAs) are among the most significant gene families enriched for cancer progression and predisposition. Through bioinformatics analyses, we identified several alterations in miRNAs copy number patterns, involving miR-221, miR-222, miR-21, miR-372, miR-30b, miR-30d and miR-31, among others. Therefore, our analyses provide the first evidence that an altered miRNAs copy number signature can statistically discriminate species more susceptible to cancer from those that are tumor resistant, paving the way for further investigations.

Keywords: DNA copy number variation; comparative study; miRNAs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Copy Number Variations*
  • Disease Susceptibility
  • Gene Dosage
  • Genetic Predisposition to Disease*
  • Genome
  • Humans
  • MicroRNAs* / genetics
  • Neoplasms* / genetics

Substances

  • MicroRNAs

Grants and funding

This research was supported by the University of Padua through M.A.P.S. Department under the program BIRD213010/21.