Potential Composite Digenic Contribution of NPC1 and NOD2 Leading to Atypical Lethal Niemann-Pick Type C with Initial Crohn's Disease-like Presentation: Genotype-Phenotype Correlation Study

Genes (Basel). 2022 May 29;13(6):973. doi: 10.3390/genes13060973.

Abstract

Niemann-Pick disease type C (NPC) is an autosomal recessive neurovisceral disease characterized by progressive neurodegeneration with variable involvement of multisystemic abnormalities. Crohn's disease (CD) is an inflammatory bowel disease (IBD) with a multifactorial etiology influenced by variants in NOD2. Here, we investigated a patient with plausible multisystemic overlapping manifestations of both NPC and CD. Her initial hospitalization was due to a prolonged fever and non-bloody diarrhea. A few months later, she presented with recurrent skin tags and anal fissures. Later, her neurological and pulmonary systems progressively deteriorated, leading to her death at the age of three and a half years. Differential diagnosis of her disease encompassed a battery of clinical testing and genetic investigations. The patient's clinical diagnosis was inconclusive. Specifically, the histopathological findings were directed towards an IBD disease. Nevertheless, the diagnosis of IBD was not consistent with the patient's subsequent neurological and pulmonary deterioration. Consequently, we utilized a genetic analysis approach to guide the diagnosis of this vague condition. Our phenotype-genotype association attempts led to the identification of candidate disease-causing variants in both NOD2 and NPC1. In this study, we propose a potential composite digenic impact of these two genes as the underlying molecular etiology. This work lays the foundation for future functional and mechanistic studies to unravel the digenic role of NOD2 and NPC1.

Keywords: Crohn’s; NOD2; NPC; NPC1; digenic; genotype–phenotype association.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Crohn Disease* / diagnosis
  • Crohn Disease* / genetics
  • Female
  • Genetic Association Studies
  • Genetic Testing
  • Humans
  • Niemann-Pick C1 Protein* / genetics
  • Niemann-Pick Disease, Type C* / diagnosis
  • Niemann-Pick Disease, Type C* / genetics
  • Niemann-Pick Disease, Type C* / pathology
  • Nod2 Signaling Adaptor Protein* / genetics

Substances

  • NOD2 protein, human
  • NPC1 protein, human
  • Niemann-Pick C1 Protein
  • Nod2 Signaling Adaptor Protein

Grants and funding

This work was supported by a grant from the Deanship of Research of Jordan University of Science and Technology, Irbid, Jordan (grant number 83/2018).