Towards a broader view of the metabolome: untargeted profiling of soluble and bound polyphenols in plants

Anal Bioanal Chem. 2022 Oct;414(25):7421-7433. doi: 10.1007/s00216-022-04134-z. Epub 2022 Jun 9.

Abstract

Phenylalanine (Phe) is a central precursor for numerous secondary plant metabolites with a multitude of biological functions. Recent studies on the fungal disease Fusarium head blight in wheat showed numerous Phe-derived defence metabolites to be induced in the presence of the pathogen. These studies also suggest a partial incorporation of Phe-derived secondary metabolites into the cell wall. To broaden the view of the metabolome to bound Phe derivatives, an existing approach using 13C-labelled Phe as tracer was extended. The developed workflow consists of three successive extractions with an acidified acetonitrile-methanol-water mixture to remove the soluble plant metabolites, followed by cell wall hydrolysis with 4M aqueous NaOH, acidification with aqueous HCl, and liquid-liquid extraction of the hydrolysate with ethyl acetate. The untargeted screening of Phe-derived metabolites revealed 156 soluble compounds and 90 compounds in the hydrolysed samples including known cell wall constituents like ferulic acid, coumaric acid, and tricin. Forty-nine metabolites were found exclusively in the hydrolysate. The average cumulative extraction yield of the soluble metabolites was 99.6%, with a range of 91.8 to 100%. Repeatability coefficients of variation of the protocol ranged from 10.5 to 25.9%, with a median of 16.3%. To demonstrate the suitability of the proposed method for a typical metabolomics application, mock-treated and Fusarium graminearum-treated wheat samples were compared. The study revealed differences between the hydrolysates of the two sample types, confirming the differential incorporation of Phe-derived metabolites into the cell wall under infection conditions.

Keywords: Hydrolytic release; LC-HRMS; Metabolomics; Stable isotope; Tracer; Triticum aestivum.

MeSH terms

  • Acetonitriles
  • Coumaric Acids*
  • Fusarium* / metabolism
  • Metabolome
  • Metabolomics / methods
  • Methanol
  • Phenylalanine
  • Plant Diseases / microbiology
  • Polyphenols
  • Sodium Hydroxide / metabolism
  • Triticum / metabolism
  • Water

Substances

  • Acetonitriles
  • Coumaric Acids
  • Polyphenols
  • Water
  • Phenylalanine
  • Sodium Hydroxide
  • Methanol