Efficient In Vitro Full-Sense-Codons Protein Synthesis

Adv Biol (Weinh). 2022 Oct;6(10):e2200023. doi: 10.1002/adbi.202200023. Epub 2022 Jun 8.

Abstract

Termination of translation is essential but hinders applications of genetic code engineering, e.g., unnatural amino acids incorporation and codon randomization mediated saturation mutagenesis. Here, for the first time, it is demonstrated that E. coli Pth and ArfB together play an efficient translation termination without codon preference in the absence of class-I release factors. By degradation of the targeted protein, both essential and alternative termination types of machinery are completely removed to disable codon-dependent termination in cell extract. Moreover, a total of 153 engineered tRNAs are screened for efficient all stop-codons decoding to construct a codon-dependent termination defect in vitro protein synthesis with all 64 sense-codons, iPSSC. Finally, this full sense genetic code achieves significant improvement in the incorporation of distinct unnatural amino acids at up to 12 positions and synthesis of protein encoding consecutive NNN codons. By decoding all information in nucleotides to amino acids, iPSSC may hold great potential in building artificial protein synthesis beyond the cell.

Keywords: codon reassignment; protein degradation; synthetic biology; translation termination.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids* / genetics
  • Cell Extracts
  • Codon / genetics
  • Escherichia coli* / genetics
  • Nucleotides / metabolism
  • Proteins / genetics

Substances

  • Cell Extracts
  • Codon
  • Amino Acids
  • Proteins
  • Nucleotides