FAM83A antisense RNA 1 (FAM83A-AS1) silencing impairs cell proliferation and induces autophagy via MET-AMPKɑ signaling in lung adenocarcinoma

Bioengineered. 2022 May;13(5):13312-13327. doi: 10.1080/21655979.2022.2081457.

Abstract

Studies demonstrate that long non-coding RNAs (lncRNAs) play vital roles in cancer progression. However, the expression pattern and molecular mechanisms of lncRNA FAM83A-AS1 in lung cancer remain largely unclear. Here, we analyzed FAM83A-AS1 expression in lung cancer tissues from three RNA-sequencing (RNA-Seq) datasets and validated these results using quantitative real-time reverse transcription polymerase chain reaction (qRT-PCR) in an independent set of lung adenocarcinoma. Cell proliferation, migration, invasion, and autophagy were analyzed after knockdown FAM83A-AS1 with siRNAs. The underlying molecular mechanisms of FAM83A-AS1 were performed by Western blot, qRT-PCR, and RNA-seq analysis. We found that FAM83A-AS1 was up-regulated in lung cancer and elevated expression was associated with poor patient survival. These results were confirmed using RT-PCR in an independent set of lung cancer. Functional study indicated that FAM83A-AS1 knockdown reduced cell proliferation, migration, invasion, and colony formation in cancer cells. FAM83A-AS1 silencing induced autophagy and cell cycle arrest at G2. Mechanistically, serval oncogenic proteins such as EGFR, MET, PI3K, and K-RAS were decreased upon FAM83A-AS1 silencing, while phosphor AMPKα and ULK1 were increased. Based on the above results, we believe that FAM83A-AS1 may have potential as a diagnosis/prognosis marker and its oncogenic role and autophagy regulation may be through MET-AMPKα signaling, which could lead to potential targeting for lung cancer therapy.

Keywords: FAM83A-AS1; Lung adenocarcinoma; MET; autophagy; lncRNA.

MeSH terms

  • AMP-Activated Protein Kinases
  • Adenocarcinoma* / pathology
  • Autophagy / genetics
  • Cell Movement / genetics
  • Cell Proliferation / genetics
  • Humans
  • Lung / pathology
  • Lung Neoplasms* / pathology
  • Neoplasm Proteins / genetics
  • Proto-Oncogene Proteins c-met
  • RNA, Antisense / genetics
  • RNA, Long Noncoding* / genetics
  • RNA, Long Noncoding* / metabolism

Substances

  • FAM83A protein, human
  • Neoplasm Proteins
  • RNA, Antisense
  • RNA, Long Noncoding
  • MET protein, human
  • Proto-Oncogene Proteins c-met
  • AMP-Activated Protein Kinases

Grants and funding

This work was supported in part by the Southern University of Science and Technology Starting Fund (G.C.); Shenzhen Municipal Science and Technology Innovation Commission Foundation (2021-255 to G.C.); High-Level University Building Fund (G.C.) and the National Natural Science Foundation of China (NSFC) (32070625 to G.C.). This project was supported by the Center for Computational Science and Engineering of Southern University of Science and Technology.