Molecular Characterization and Identification of Potential Inhibitors for 'E' Protein of Dengue Virus

Viruses. 2022 Apr 29;14(5):940. doi: 10.3390/v14050940.

Abstract

Dengue is an arthropod-borne acute febrile illness caused by Dengue Virus (DENV), a member of Flaviviridae. Severity of the infection ranges from mild self-limiting illness to severe life-threatening hemorrhagic fever (DHF) and dengue shock syndrome (DSS). To date, there is no specific antiviral therapy established to treat the infection. The current study reports the epidemiology of DENV infections and potential inhibitors of DENV 'E' protein. Among the various serotypes, DENV-2 serotype was observed more frequently, followed by DENV-4, DENV-1, and DENV-3. New variants of existing genotypes were observed in DENV-1, 2, and 4 serotypes. Predominantly, the severe form of dengue was attributable to DENV-2 infections, and the incidence was more common in males and pediatric populations. Both the incidence and the disease severity were more common among the residents of non-urban environments. Due to the predominantly self-limiting nature of primary dengue infection and folk medicine practices of non-urban populations, we observed a greater number of secondary dengue cases than primary dengue cases. Hemorrhagic manifestations were more in secondary dengue in particularly in the pediatric group. Through different computational methods, ligands RGBLD1, RGBLD2, RGBLD3, and RGBLD4 are proposed as potential inhibitors in silico against DENV-1, -2, -3, and -4 serotypes.

Keywords: dengue virus; envelope protein inhibitors; genotypes and serotypes; molecular dynamics simulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antiviral Agents* / chemistry
  • Antiviral Agents* / pharmacology
  • Dengue Virus* / drug effects
  • Dengue Virus* / genetics
  • Dengue* / epidemiology
  • Humans
  • Incidence
  • Serogroup
  • Severe Dengue* / epidemiology
  • Viral Envelope Proteins* / antagonists & inhibitors

Substances

  • Antiviral Agents
  • Viral Envelope Proteins

Grants and funding

This research was partially supported by the Sri Balaji Arogya Vara Prasadini Scheme (SBAVP) (SBAVP-RG/Ph.D./18), Sri Venkateswara Institute of Medical Sciences (SVIMS), University and Tirumala Tirupati Devastanams (TTD), Tirupati, India. The Indian Council of Medical Research (ICMR) provided the Senior Research Fellowship (SRF) (2017-1024/CMB-BMS) grant to the researchers.