Epigenetic drug screening defines a PRMT5 inhibitor-sensitive pancreatic cancer subtype

JCI Insight. 2022 May 23;7(10):e151353. doi: 10.1172/jci.insight.151353.

Abstract

Systemic therapies for pancreatic ductal adenocarcinoma (PDAC) remain unsatisfactory. Clinical prognosis is particularly poor for tumor subtypes with activating aberrations in the MYC pathway, creating an urgent need for novel therapeutic targets. To unbiasedly find MYC-associated epigenetic dependencies, we conducted a drug screen in pancreatic cancer cell lines. Here, we found that protein arginine N-methyltransferase 5 (PRMT5) inhibitors triggered an MYC-associated dependency. In human and murine PDACs, a robust connection of MYC and PRMT5 was detected. By the use of gain- and loss-of-function models, we confirmed the increased efficacy of PRMT5 inhibitors in MYC-deregulated PDACs. Although inhibition of PRMT5 was inducing DNA damage and arresting PDAC cells in the G2/M phase of the cell cycle, apoptotic cell death was executed predominantly in cells with high MYC expression. Experiments in primary patient-derived PDAC models demonstrated the existence of a highly PRMT5 inhibitor-sensitive subtype. Our work suggests developing PRMT5 inhibitor-based therapies for PDAC.

Keywords: Cancer; Cell Biology; Oncology; Pharmacology.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Carcinoma, Pancreatic Ductal* / drug therapy
  • Carcinoma, Pancreatic Ductal* / genetics
  • Carcinoma, Pancreatic Ductal* / pathology
  • Cell Line, Tumor
  • Drug Evaluation, Preclinical
  • Early Detection of Cancer
  • Enzyme Inhibitors / pharmacology
  • Enzyme Inhibitors / therapeutic use
  • Epigenesis, Genetic
  • Humans
  • Mice
  • Pancreatic Neoplasms* / drug therapy
  • Pancreatic Neoplasms* / genetics
  • Pancreatic Neoplasms* / metabolism
  • Protein-Arginine N-Methyltransferases / genetics
  • Proto-Oncogene Proteins c-myc / genetics
  • Proto-Oncogene Proteins c-myc / metabolism

Substances

  • Enzyme Inhibitors
  • Proto-Oncogene Proteins c-myc
  • PRMT5 protein, human
  • Protein-Arginine N-Methyltransferases

Grants and funding

This work was supported by the Deutsche Forschungsgemeinschaft (DFG): SCHN 959/3-2 to G.S.; SFB1321 (Project-ID 329628492) C13 to G.S.; SFB1321 S01 and S02 to G.S., M.R., D.S., and R.R; SCHN 959/6-1 to G.S.; RE 3723/4-1 to M.R.; Wilhelm-Sander-Stiftung (2017.048.2 to G.S. and 2019.086.1 to G.S.); Deutsche Krebshilfe (70113760 to G.S.; Max Eder Program 111273 to M.R.).