The complete nucleotide sequence of Viburnum odoratissimum chloroplast genome

Le Thi Yen; Joonho Park

doi:10.1080/23802359.2020.1749151

The complete nucleotide sequence of Viburnum odoratissimum chloroplast genome

Mitochondrial DNA B Resour. 2022 Apr 11;7(4):635-636. doi: 10.1080/23802359.2020.1749151. eCollection 2022.

Authors

Le Thi Yen¹, Joonho Park¹

Affiliation

¹ Department of Fine Chemistry, Seoul National University of Science and Technology, Seoul, South Korea.

Abstract

The complete chloroplast genome (cpDNA) Viburnum odoratissimumis sequenced and assembled from the whole genome data. The cpDNA of V. odoratissimum is 158,744bp in lengthwith the overall GC content of 38.1%. It consists of a pair of inverted repeats (IRa and IRb, 26,494bp) which separate a large single copy (LCS, 87,348 bp) and small single copy (SSC,18,408 bp). The complete chloroplast genome contains 129 genes, including 84 protein-coding genes, 8 rRNA genes and 37 tRNA genes. A phylogenetic tree of DNA sequences of barcoding regions, including rbcL, matK, psbA-trnHfrom 8 species of the Genus Viburnum shows that V. odoratissimum is closely related to V. furcatum and V. burejaeticum.

Keywords: Chloroplast genome; Viburnum odoratissimum; phylogenetic tree.

Grants and funding

This study was supported by the human resource development programs for green convergence technology funded by the korea ministry of environment (MOE).