Free spermidine evokes superoxide radicals that manifest toxicity

Elife. 2022 Apr 13:11:e77704. doi: 10.7554/eLife.77704.

Abstract

Spermidine and other polyamines alleviate oxidative stress, yet excess spermidine seems toxic to Escherichia coli unless it is neutralized by SpeG, an enzyme for the spermidine N-acetyl transferase function. Thus, wild-type E. coli can tolerate applied exogenous spermidine stress, but ΔspeG strain of E. coli fails to do that. Here, using different reactive oxygen species (ROS) probes and performing electron paramagnetic resonance spectroscopy, we provide evidence that although spermidine mitigates oxidative stress by lowering overall ROS levels, excess of it simultaneously triggers the production of superoxide radicals, thereby causing toxicity in the ΔspeG strain. Furthermore, performing microarray experiment and other biochemical assays, we show that the spermidine-induced superoxide anions affected redox balance and iron homeostasis. Finally, we demonstrate that while RNA-bound spermidine inhibits iron oxidation, free spermidine interacts and oxidizes the iron to evoke superoxide radicals directly. Therefore, we propose that the spermidine-induced superoxide generation is one of the major causes of spermidine toxicity in E. coli.

Keywords: E. coli; Escherichia coli; SpeG; biochemistry; chemical biology; chromosomes; gene expression; iron metabolism; oxidative stress; spermidine toxicity; superoxide radical.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Escherichia coli / genetics
  • Iron / toxicity
  • Reactive Oxygen Species
  • Spermidine*
  • Superoxides*

Substances

  • Reactive Oxygen Species
  • Superoxides
  • Iron
  • Spermidine

Associated data

  • GEO/GSE154618

Grants and funding

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.