Expansion of L452R-Positive SARS-CoV-2 Omicron Variant, Northern Lombardy, Italy

Emerg Infect Dis. 2022 Jun;28(6):1301-1302. doi: 10.3201/eid2806.220210. Epub 2022 Apr 13.

Abstract

We report 25 cases of infection with SARS-CoV-2 Omicron variant containing spike protein L452R mutation in northern Lombardy, Italy. Prevalence of this variant was >30% in this region, compared with <0.5% worldwide. Many laboratories are using previously developed L452R-specific PCRs to discriminate Omicron from Delta mutations, but these tests may be unreliable.

Keywords: COVID-19; Italy; SARS-CoV-2; SARS-CoV-2 Omicron variant; coronavirus disease; respiratory infections; severe acute respiratory syndrome coronavirus 2; viruses; zoonoses.

MeSH terms

  • COVID-19* / epidemiology
  • Humans
  • Mutation
  • SARS-CoV-2* / genetics
  • Spike Glycoprotein, Coronavirus / genetics
  • Spike Glycoprotein, Coronavirus / metabolism

Substances

  • Spike Glycoprotein, Coronavirus
  • spike protein, SARS-CoV-2

Supplementary concepts

  • SARS-CoV-2 variants