Ribosomal protein S18 acetyltransferase RimI is responsible for the acetylation of elongation factor Tu

J Biol Chem. 2022 May;298(5):101914. doi: 10.1016/j.jbc.2022.101914. Epub 2022 Apr 7.

Abstract

N-terminal acetylation is widespread in the eukaryotic proteome but in bacteria is restricted to a small number of proteins mainly involved in translation. It was long known that elongation factor Tu (EF-Tu) is N-terminally acetylated, whereas the enzyme responsible for this process was unclear. Here, we report that RimI acetyltransferase, known to modify ribosomal protein S18, is likewise responsible for N-acetylation of the EF-Tu. With the help of inducible tufA expression plasmid, we demonstrated that the acetylation does not alter the stability of EF-Tu. Binding of aminoacyl tRNA to the recombinant EF-Tu in vitro was found to be unaffected by the acetylation. At the same time, with the help of fast kinetics methods, we demonstrate that an acetylated variant of EF-Tu more efficiently accelerates A-site occupation by aminoacyl-tRNA, thus increasing the efficiency of in vitro translation. Finally, we show that a strain devoid of RimI has a reduced growth rate, expanded to an evolutionary timescale, and might potentially promote conservation of the acetylation mechanism of S18 and EF-Tu. This study increased our understanding of the modification of bacterial translation apparatus.

Keywords: EF-Tu; bacteria; post-translational modification; ribosome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Acetyltransferases* / genetics
  • Acetyltransferases* / metabolism
  • Bacteria / metabolism*
  • Guanosine Triphosphate / metabolism
  • Kinetics
  • Peptide Elongation Factor Tu* / genetics
  • Peptide Elongation Factor Tu* / metabolism
  • Peptide Elongation Factors / genetics
  • Peptide Elongation Factors / metabolism
  • RNA, Transfer, Amino Acyl / metabolism
  • Ribosomal Proteins
  • Ribosomes / metabolism

Substances

  • Peptide Elongation Factors
  • RNA, Transfer, Amino Acyl
  • Ribosomal Proteins
  • ribosomal protein S18
  • Guanosine Triphosphate
  • Acetyltransferases
  • Peptide Elongation Factor Tu