The freshwater annelid worm genus Limnodrilus, including the widely distributed L. claparedianus Ratzel, 1868, is common in Chinese freshwater ecosystems. One species, previously recognized as morphologically intermediate between L. claparedianus and the North American taxon L. cervix Brinkhurst, 1963, is here described as a new species, L. paraclaparedianus Zhou Cui n. sp., using both molecular and traditional taxonomy. Comparisons of sequences of the Cytochrome Oxidase subunit I (COI) mtDNA in a sample of Limnodrilus species showed that the distances between species were generally higher than the divergences within them. Phylogenetic analysis of COI as well as 16S mtDNA and Internal Transcribed Spacer 2 (ITS2) nDNA confirmed that the new species is an independent lineage. Moreover, morphological differences in the prostomium, characteristics of the chaetae and internal genitalia support the separation of the species.