PotN represents a novel energy-state sensing PII subfamily, occurring in firmicutes

FEBS J. 2022 Sep;289(17):5305-5321. doi: 10.1111/febs.16431. Epub 2022 Mar 24.

Abstract

PII proteins are signal processor proteins that regulate the cellular metabolism of Bacteria, Archea and plant chloroplasts typically in response to the cellular nitrogen status. Here, we report the first biochemical characterization of a novel PII-like protein PotN from Lentilactobacillus hilgardii. PotN is encoded in an operon together with the potABCD genes, encoding the ABC transporter for spermidine/putrescine. Like canonical PII proteins, the native PotN has a trimeric structure and competitively binds ATP and ADP, but it does not bind 2-oxoglutarate. Immunoprecipitation and pull-down experiments revealed that PotN is associated in vivo with the transcriptional regulator GlnR and the beta-subunit of pyruvate/2-oxoglutarate/acetoin dehydrogenase AcoB. Moreover, in vitro assays revealed that the ATPase domain of PotA also is able to interact with PotN. Interaction analyses demonstrated that PotN preferentially associates with PotA in the ADP state, whereas it binds to GlnR at elevated ATP levels. This suggests that PotN regulates the transport of polyamines and GlnR-dependent gene expression in response to the energy availability for the cell.

Keywords: Lentilactobacillus hilgardii; PII-like protein PotN; pyruvate/2-oxoglutarate/acetoin dehydrogenase AcoB; transcription factor GlnR; transporter of polyamines PotABCD.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Diphosphate / metabolism
  • Adenosine Triphosphate / metabolism
  • Bacterial Proteins / metabolism
  • Firmicutes* / metabolism
  • Ketoglutaric Acids* / metabolism
  • Nitrogen / metabolism
  • PII Nitrogen Regulatory Proteins / metabolism

Substances

  • Bacterial Proteins
  • Ketoglutaric Acids
  • PII Nitrogen Regulatory Proteins
  • Adenosine Diphosphate
  • Adenosine Triphosphate
  • Nitrogen

Associated data

  • RefSeq/QIR10170
  • RefSeq/AIS03498
  • RefSeq/SBW30903
  • RefSeq/CAB15669
  • RefSeq/SQE56252
  • RefSeq/AAC73553
  • RefSeq/AAC75606
  • RefSeq/AAF42322
  • RefSeq/AFK17834
  • RefSeq/AFK17836
  • RefSeq/WP_042707534
  • RefSeq/AEA46717
  • RefSeq/BAD79382
  • RefSeq/AEE8209