Spinach-based RNA mimicking GFP in plant cells

Funct Integr Genomics. 2022 Jun;22(3):423-428. doi: 10.1007/s10142-022-00835-x. Epub 2022 Mar 10.

Abstract

Spinach RNA-mimicking GFP (S-RMG) has been successfully used to monitor cellular RNAs including microRNAs in bacterium, yeast, and human cells. However, S-RMG has not been established in plants. In this study, we found that like bacterial, yeast, and human cellular tRNAs, plant tRNAs such as tRNALys can protect and/or stabilize the Spinach RNA aptamer interaction with the fluorophore DFHBI enabling detectable levels of green fluorescence to be emitted. The tRNALys-Spinach-tRNALys, once delivered into "chloroplast-free" onion epidermal cells can emit strong green fluorescence in the presence of DFHBI. Our results demonstrate for the first time that Spinach-based RNA visualization has the potential for in vivo monitoring of RNAs in plant cells.

Keywords: Onion epidermal cell; RNA aptamer; RNA fluorescence; Spinach-RMG.

MeSH terms

  • Humans
  • Plant Cells
  • Plants / genetics
  • RNA*
  • RNA, Plant / genetics
  • RNA, Transfer
  • RNA, Transfer, Lys
  • Saccharomyces cerevisiae / genetics
  • Spinacia oleracea* / genetics

Substances

  • RNA, Plant
  • RNA, Transfer, Lys
  • RNA
  • RNA, Transfer