AI-Driven Synthetic Route Design Incorporated with Retrosynthesis Knowledge

J Chem Inf Model. 2022 Mar 28;62(6):1357-1367. doi: 10.1021/acs.jcim.1c01074. Epub 2022 Mar 8.

Abstract

Computer-aided synthesis planning (CASP) aims to assist chemists in performing retrosynthetic analysis for which they utilize their experiments, intuition, and knowledge. Recent breakthroughs in machine learning (ML) techniques, including deep neural networks, have significantly improved data-driven synthetic route designs without human intervention. However, learning chemical knowledge by ML for practical synthesis planning has not yet been adequately achieved and remains a challenging problem. In this study, we developed a data-driven CASP application integrated with various portions of retrosynthesis knowledge called "ReTReK" that introduces the knowledge as adjustable parameters into the evaluation of promising search directions. The experimental results showed that ReTReK successfully searched synthetic routes based on the specified retrosynthesis knowledge, indicating that the synthetic routes searched with the knowledge were preferred to those without the knowledge. The concept of integrating retrosynthesis knowledge as adjustable parameters into a data-driven CASP application is expected to enhance the performance of both existing data-driven CASP applications and those under development.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Humans
  • Machine Learning*
  • Neural Networks, Computer*
  • Software

Associated data

  • Dryad/10.6084/m9.figshare.5104873.v1