Rational Optimization of Dihydropyrimidinone-Quinoline Hybrids as Plasmodium falciparum Glutathione Reductase Inhibitors

ChemMedChem. 2022 May 18;17(10):e202200034. doi: 10.1002/cmdc.202200034. Epub 2022 Mar 21.

Abstract

A series of dihydropyrimidinone-based antimalarial compounds were designed and synthesised based on the previously identified amide-based quinoline hybrids which showed good resistance reversal ability against the resistant strain of Plasmodium falciparum. The aromatic ring on the dihydropyrimidinone of the original hits was exchanged for a methyl group to bring the molecular weights below 500 Da and also determine the effect of the aromatic ring count on the resistance reversal ability of the hybrids. Apart from the previously used amide bond, the hybrid linker was also extended to the triazole linker. Although the triazole linker is synthetically easier to access, the use of an amide linker seems to have an activity advantage. The synthesised compounds in addition to the previously identified hits were subjected to molecular docking particularly targeting the orthosteric site of Plasmodium falciparum glutathione reductase (PfGR) protein. The ligand with the best binding interaction was rationally optimised to increase its suitability as a competitive inhibitor against the cofactor of the PfGR. Two of the optimised ligands showed better binding affinities than the cofactor while one of the two ligands displayed hydrophobically packed correlated hydrogen-bond which is very important in maintaining the ligand stability within the protein. In silico ADME predictions of the synthesised compounds indicate that these compounds possess good pharmacokinetic properties.

Keywords: Antimalarial agents; Dihydropyrimidinones; Molecular docking; Rational optimization; Resistance reversal.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amides / pharmacology
  • Antimalarials* / chemistry
  • Antimalarials* / pharmacology
  • Glutathione Reductase / pharmacology
  • Ligands
  • Molecular Docking Simulation
  • Plasmodium falciparum
  • Quinolines* / chemistry
  • Triazoles / chemistry

Substances

  • Amides
  • Antimalarials
  • Ligands
  • Quinolines
  • Triazoles
  • Glutathione Reductase