Genome-wide analysis and expression profiling of Cation/H+ exchanger (CAX) family genes reveal likely functions in cadmium stress responses in poplar

Int J Biol Macromol. 2022 Apr 15:204:76-88. doi: 10.1016/j.ijbiomac.2022.01.202. Epub 2022 Feb 4.

Abstract

Cadmium, a toxic heavy metal, seriously affects human health and ecological security. The cation/H+ exchanger (CAX) family is a unique metal transporter that plays a crucial role in Cd acquisition, transfer, and remission in plants. Although there are many studies related to the genome-wide analysis of Populus trichocarpa, little research has been done on the CAX family genes, especially concerning Cd stress. In this study, genome-wide analysis of the Populus CAX family identified seven stress-related CAX genes. The evolutionary tree indicated that the CaCA family genes were grouped into four clusters. Moreover, seven pairs of genes were derived by segmental duplication in poplars. Cis-acting element analysis identified numerous stress-related elements in the promoters of diverse PtrCAXs. Furthermore, some PtrCAXs were up-regulated by drought, beetle, and mechanical damage, indicating their possible function in regulating stress response. Under cadmium stress, all CAX genes in the roots were up-regulated. Our findings suggest that plants may regulate their response to Cd stress through the TF-CAXs module. Comprehensively investigating the CAX family provides a scientific basis for the phytoremediation of heavy metal pollution by Populus.

Keywords: CAX gene family; Cadmium stress; Expression pattern; Genome-wide; Poplar.

MeSH terms

  • Cadmium / metabolism
  • Cadmium / toxicity
  • Cations / metabolism
  • Gene Expression Regulation, Plant
  • Phylogeny
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • Populus* / genetics
  • Populus* / metabolism
  • Stress, Physiological / genetics

Substances

  • Cations
  • Plant Proteins
  • Cadmium