USP44 regulates irradiation-induced DNA double-strand break repair and suppresses tumorigenesis in nasopharyngeal carcinoma

Nat Commun. 2022 Jan 25;13(1):501. doi: 10.1038/s41467-022-28158-2.

Abstract

Radiotherapy is the primary treatment for patients with nasopharyngeal carcinoma (NPC), and approximately 20% of patients experience treatment failure due to tumour radioresistance. However, the exact regulatory mechanism remains poorly understood. Here, we show that the deubiquitinase USP44 is hypermethylated in NPC, which results in its downregulation. USP44 enhances the sensitivity of NPC cells to radiotherapy in vitro and in vivo. USP44 recruits and stabilizes the E3 ubiquitin ligase TRIM25 by removing its K48-linked polyubiquitin chains at Lys439, which further facilitates the degradation of Ku80 and inhibits its recruitment to DNA double-strand breaks (DSBs), thus enhancing DNA damage and inhibiting DNA repair via non-homologous end joining (NHEJ). Knockout of TRIM25 reverses the radiotherapy sensitization effect of USP44. Clinically, low expression of USP44 indicates a poor prognosis and facilitates tumour relapse in NPC patients. This study suggests the USP44-TRIM25-Ku80 axis provides potential therapeutic targets for NPC patients.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Apoptosis / genetics
  • Apoptosis / radiation effects
  • Carcinogenesis / genetics*
  • Carcinogenesis / metabolism
  • Cell Line
  • Cell Line, Tumor
  • DNA Breaks, Double-Stranded / radiation effects*
  • DNA Methylation
  • DNA Repair / genetics*
  • G2 Phase Cell Cycle Checkpoints / genetics
  • G2 Phase Cell Cycle Checkpoints / radiation effects
  • Gene Expression Regulation, Neoplastic
  • HEK293 Cells
  • Humans
  • Ku Autoantigen / genetics
  • Ku Autoantigen / metabolism
  • Nasopharyngeal Carcinoma / genetics*
  • Nasopharyngeal Carcinoma / metabolism
  • Nasopharyngeal Carcinoma / pathology
  • Nasopharyngeal Neoplasms / genetics*
  • Nasopharyngeal Neoplasms / metabolism
  • Nasopharyngeal Neoplasms / pathology
  • Promoter Regions, Genetic / genetics
  • Radiation Tolerance / genetics
  • Survival Analysis
  • Transcription Factors / genetics
  • Transcription Factors / metabolism
  • Tripartite Motif Proteins / genetics
  • Tripartite Motif Proteins / metabolism
  • Ubiquitin Thiolesterase / genetics*
  • Ubiquitin Thiolesterase / metabolism
  • Ubiquitin-Protein Ligases / genetics
  • Ubiquitin-Protein Ligases / metabolism
  • Ubiquitination

Substances

  • Transcription Factors
  • Tripartite Motif Proteins
  • TRIM25 protein, human
  • Ubiquitin-Protein Ligases
  • USP44 protein, human
  • Ubiquitin Thiolesterase
  • Ku Autoantigen